Thibaut Jombart
Author of 29 CRAN packages
Thibaut Jombart has completed over 29 packages! The dedication here is off the charts—clearly a coding superstar! Thibaut Jombart teamed up with 115 other developers, making this project a gigantic collaborative effort. The coding world is a better place for it!
29 Packages
- EpiEstimEstimate Time Varying Reproduction Numbers from Epidemic Curves
- ade4Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
- adegenetExploratory Analysis of Genetic and Genomic Data
- adephyloExploratory Analyses for the Phylogenetic Comparative Method
- adespatialMultivariate Multiscale Spatial Analysis
- apexPhylogenetic Methods for Multiple Gene Data
- cleanepiClean and Standardize Epidemiological Data
- distcreteDiscrete Distribution Approximations
- earlyREstimation of Transmissibility in the Early Stages of a Disease Outbreak
- epicontactsHandling, Visualisation and Analysis of Epidemiological Contacts
- epiflowsPredicting Disease Spread from Flow Data
- epitrixSmall Helpers and Tricks for Epidemics Analysis
- finalsizeCalculate the Final Size of an Epidemic
- hierfstatEstimation and Tests of Hierarchical F-Statistics
- i2extrasFunctions to Work with 'incidence2' Objects
- incidenceCompute, Handle, Plot and Model Incidence of Dated Events
- incidence2Compute, Handle and Plot Incidence of Dated Events
- linelistTagging and Validating Epidemiological Data
- matchmakerFlexible Dictionary-Based Cleaning
- o2geosocialReconstruction of Transmission Chains from Surveillance Data
- odinODE Generation and Integration
- outbreaker2Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data
- outbreaksA Collection of Disease Outbreak Data
- pegasPopulation and Evolutionary Genetics Analysis System
- projectionsProject Future Case Incidence
- reportfactoryLightweight Infrastructure for Handling Multiple R Markdown Documents
- treespaceStatistical Exploration of Landscapes of Phylogenetic Trees
- trendevalEvaluate Trending Models
- trendingModel Temporal Trends
Team
- Elisabeth Dahlqwist
- Anne Cori
- Justin Lessler
- Zhian N. Kamvar
- Simon Cauchemez
- Neil M. Ferguson
- Christophe Fraser
- P. Alex Demarsh
- Shikun Li
- Jonathan A. Polonsky
- Jake Stockwin
- Robin Thompson
- Rolina van Gaalen
- Jean Thioulouse
- Sébastien Ollier
- Stéphane Dray
- Jean R. Lobry
- Pierre Legendre
- Daniel Borcard
- Stéphanie Bougeard
- Anne-Béatrice Dufour
- Aurélie Siberchicot
- Daniel Chessel
- Sandrine Pavoine
- Peter Solymos
- Klaus Schliep
- Federico Calboli
- Alexandre Courtiol
- Frédéric Michaud
- Libor Morkovsky
- Caitlin Collins
- Vladimir Mikryukov
- Roman Lustrik
- Marie-Pauline Beugin
- RJ Ewing
- Brian J. Knaus
- Pavel Dimens
- Rebecca DeCamp
- Tiago Maié
- Ismail Ahmed
- Lindsay V. Clark
- Max Coulter
- Ivan Krylov
- Anders Ellern Bilgrau
- Sylvie Clappe
- Guillaume Guenard
- Guillaume Larocque
- Naima Madi
- Guillaume Blanchet
- David Bauman
- John Chambers
- Hélène H Wagner
- Eric Archer
- Zhian Namir Kamvar
- Rebecca Harris
- Joshua W. Lambert
- Bubacarr Bah
- Abdoelnaser Degoot
- Nuredin Mohammed
- Pratik R. Gupte
- London School of Hygiene and Tropical Medicine, LSHTM
- Andree Valle-Campos
- Chris Hartgerink
- James M. Azam
- Bankolé Ahadzie
- Hugo Gruson
- data.org
- Karim Mané
- Rich FitzJohn
- Steph Locke
- Tim Taylor
- Pierre Nouvellet
- Janetta Skarp
- VP Nagraj
- Finlay Campbell
- Nistara Randhawa
- Bertrand Sudre
- Thomas Crellen
- Pawel Piatkowski
- Paula Moraga
- Isobel Blake
- Salla E. Toikkanen
- Dirk Schumacher
- Flavio Finger
- Charlie Whittaker
- Adam Kucharski
- Pratik Gupte
- Edwin Van Leeuwen
- Rosalind Eggo
- Jerome Goudet
- Olivier Hardy
- Jun Cai
- Sangeeta Bhatia
- Jakob Schumacher
- Juliet R.C. Pulliam
- Patrick Barks
- Sebastian Funk
- Alexis Robert
- Adam J Kucharski
- Imperial College of Science, Technology and Medicine
- Gerry Tonkin-Hill
- Rich Fitzjohn
- Kristjan Eldjarn
- Eric Brown
- Sang Woo Park
- Simon Frost
- Emmanuel Paradis
- David Winter
- Brian Knaus
- Alastair Potts
- Stephane Ghozzi
- Amy Gimma
- Michelle Kendall
- Jacob Almagro-Garcia
- Caroline Colijn