Thibaut Jombart
Author of 28 CRAN packages
Thibaut Jombart has been on fire, working on 28 packages to date. Honestly, does Thibaut Jombart even sleep? This is some serious dedication! Thibaut Jombart teamed up with 106 other developers, making this project a gigantic collaborative effort. The coding world is a better place for it!
28 Packages
- EpiEstimEstimate Time Varying Reproduction Numbers from Epidemic Curves
- ade4Analysis of Ecological Data
- adegenetExploratory Analysis of Genetic and Genomic Data
- adephyloExploratory Analyses for the Phylogenetic Comparative Method
- adespatialMultivariate Multiscale Spatial Analysis
- apexPhylogenetic Methods for Multiple Gene Data
- distcreteDiscrete Distribution Approximations
- earlyREstimation of Transmissibility in the Early Stages of a Disease Outbreak
- epicontactsHandling, Visualisation and Analysis of Epidemiological Contacts
- epiflowsPredicting Disease Spread from Flow Data
- epitrixSmall Helpers and Tricks for Epidemics Analysis
- finalsizeCalculate the Final Size of an Epidemic
- hierfstatEstimation and Tests of Hierarchical F-Statistics
- i2extrasFunctions to Work with 'incidence2' Objects
- incidenceCompute, Handle, Plot and Model Incidence of Dated Events
- incidence2Compute, Handle and Plot Incidence of Dated Events
- linelistTagging and Validating Epidemiological Data
- matchmakerFlexible Dictionary-Based Cleaning
- o2geosocialReconstruction of Transmission Chains from Surveillance Data
- odinODE Generation and Integration
- outbreaker2Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data
- outbreaksA Collection of Disease Outbreak Data
- pegasPopulation and Evolutionary Genetics Analysis System
- projectionsProject Future Case Incidence
- reportfactoryLightweight Infrastructure for Handling Multiple R Markdown Documents
- treespaceStatistical Exploration of Landscapes of Phylogenetic Trees
- trendevalEvaluate Trending Models
- trendingModel Temporal Trends
Team
- Anne Cori
- Simon Cauchemez
- Neil M. Ferguson
- Christophe Fraser
- Elisabeth Dahlqwist
- P. Alex Demarsh
- Zhian N. Kamvar
- Justin Lessler
- Shikun Li
- Jonathan A. Polonsky
- Jake Stockwin
- Robin Thompson
- Rolina van Gaalen
- Stéphane Dray
- Anne-Béatrice Dufour
- Jean Thioulouse
- Sandrine Pavoine
- Jean R. Lobry
- Sébastien Ollier
- Daniel Borcard
- Pierre Legendre
- Stéphanie Bougeard
- Aurélie Siberchicot. Based on earlier work by Daniel Chessel.
- Caitlin Collins
- Roman Lustrik
- Marie-Pauline Beugin
- Brian J. Knaus
- Peter Solymos
- Vladimir Mikryukov
- Klaus Schliep
- Tiago Maié
- Libor Morkovsky
- Ismail Ahmed
- Federico Calboli
- RJ Ewing
- Frédéric Michaud
- Rebecca DeCamp
- Alexandre Courtiol
- Lindsay V. Clark
- Pavel Dimens
- Anders Ellern Bilgrau
- David Bauman
- Guillaume Blanchet
- Sylvie Clappe
- Guillaume Guenard
- Guillaume Larocque
- Naima Madi
- Hélène H Wagner
- Aurélie Siberchicot
- Zhian Namir Kamvar
- Eric Archer
- Rebecca Harris
- Steph Locke
- Rich FitzJohn
- Pierre Nouvellet
- Janetta Skarp
- Tim Taylor
- Finlay Campbell
- Nistara Randhawa
- Bertr
- Sudre
- VP Nagraj
- Thomas Crellen
- Pawel Piatkowski
- Paula Moraga
- Isobel Blake
- Salla E. Toikkanen
- Dirk Schumacher
- Flavio Finger
- Charlie Whittaker
- Pratik Gupte
- Edwin Van Leeuwen
- Adam Kucharski
- Rosalind Eggo
- Hugo Gruson
- Andree Valle-Campos
- Joshua W. Lambert
- Jerome Goudet
- Olivier Hardy
- Jun Cai
- Sangeeta Bhatia
- Jakob Schumacher
- Juliet R.C. Pulliam
- Chris Hartgerink
- Patrick Barks
- Alexis Robert
- Sebastian Funk
- Adam J Kucharski
- Imperial College of Science
- Technology
- Medicine
- Rich Fitzjohn
- Gerry Tonkin-Hill
- Kristjan Eldjarn
- Simon Frost
- Sang Woo Park
- Eric Brown
- Emmanuel Paradis
- Brian Knaus
- Alastair Potts
- David Winter
- Stephane Ghozzi
- Amy Gimma
- Michelle Kendall
- Jacob Almagro-Garcia
- Caroline Colijn